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  5. Aev_g17169

Aev_g17169


Description : arabinogalactan protein *(Xylogen) & original description: none


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g17169

Target Alias Description ECC score Gene Family Method Actions
AT2G44290 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
Als_g04701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0054.g033619 No alias not classified & original description: CDS=1-465 0.02 OrthoFinder output from all 47 species
Ceric.01G102400.1 Ceric.01G102400 not classified & original description: pacid=50593041... 0.03 OrthoFinder output from all 47 species
Ceric.12G092700.1 Ceric.12G092700 not classified & original description: pacid=50601364... 0.03 OrthoFinder output from all 47 species
Dac_g08118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029796001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
GSVIVT01032956001 No alias Lipid transfer-like protein VAS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_24349 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g58940.1 LOC_Os03g58940 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10436581g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017064 No alias arabinogalactan protein *(Xylogen) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024327 No alias not classified & original description: CDS=1-432 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024331 No alias not classified & original description: CDS=1491-1979 0.02 OrthoFinder output from all 47 species
Solyc01g005985.1.1 Solyc01g005985 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Solyc09g082290.3.1 Solyc09g082290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g11499 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001853_P001 Zm00001e001853 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 25 112
No external refs found!