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  5. Ore_g27850

Ore_g27850 (UBP23)


Aliases : UBP23

Description : deubiquitinase *(UBP23) & original description: none


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g27850

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00021060 UBP16,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Adi_g013897 UBP25 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g013898 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060737 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069165 UBP23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49835.t1 UBP18, Aspi01Gene49835 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07711 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12069 UBP23 deubiquitinase *(UBP23) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G015900.1 UBP25, Ceric.22G015900 not classified & original description: pacid=50613832... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.67 UBP15 Protein degradation.peptidase families.cysteine-type... 0.01 OrthoFinder output from all 47 species
Cre16.g648600 UBP19 No description available 0.02 OrthoFinder output from all 47 species
Dac_g23037 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08851 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26398 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07912 UBP23 deubiquitinase *(UBP23) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26924 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000696001 UBP15 Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
GSVIVT01001911001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01033166001 UBP18 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01038082001 UBP25 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Gb_28125 UBP25 deubiquitinase (UBP25) 0.03 OrthoFinder output from all 47 species
LOC_Os02g14730.1 UBP15, LOC_Os02g14730 deubiquitinase (UBP15-21) 0.05 OrthoFinder output from all 47 species
LOC_Os09g28940.1 UBP17, LOC_Os09g28940 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Len_g45877 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03280 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10823 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11163 UBP25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429414g0020 UBP18 deubiquitinase (UBP15-21) 0.04 OrthoFinder output from all 47 species
MA_53569g0010 UBP23 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species
Mp1g03220.1 UBP25 Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Mp2g05560.1 UBP18 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Mp3g16110.1 UBP23 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species
Ore_g22576 UBP25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05280 UBP25 deubiquitinase *(UBP25) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g25431 UBP16 deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13940 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15722 UBP19 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20105 UBP19 deubiquitinase *(UBP15-21) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g076210.3.1 UBP16, Solyc04g076210 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Solyc07g061780.4.1 UBP15, Solyc07g061780 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Solyc08g069050.3.1 UBP19, Solyc08g069050 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Zm00001e014332_P001 UBP15, Zm00001e014332 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Zm00001e022516_P001 UBP17, Zm00001e022516 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Zm00001e023273_P001 UBP21, Zm00001e023273 Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e024878_P003 UBP15, Zm00001e024878 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 116 415
No external refs found!