1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g28354

Ore_g28354


Description : component *(uL1c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002232_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g28354

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00035950 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
AT3G63490 No alias Ribosomal protein L1p/L10e family 0.04 OrthoFinder output from all 47 species
Adi_g083284 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Aev_g11306 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ala_g13358 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Als_g06949 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aob_g31675 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g11179 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aspi01Gene02934.t1 Aspi01Gene02934 component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035757 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g25894 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.36G042400.1 Ceric.36G042400 component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cre02.g088900 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dac_g00779 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dcu_g06155 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dde_g12366 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01032196001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Gb_16169 No alias component psRPL1 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
LOC_Os05g32220.1 LOC_Os05g32220 component psRPL1 of large ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species
Len_g24587 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Lfl_g03897 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g19309 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
MA_10002614g0010 No alias 50S ribosomal protein L1, chloroplastic OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Mp1g07500.1 No alias component psRPL1 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Msp_g12689 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Nbi_g11958 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Pir_g01275 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pp3c23_11170V3.1 Pp3c23_11170 Ribosomal protein L1p/L10e family 0.03 OrthoFinder output from all 47 species
Ppi_g41124 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023589 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sam_g18339 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Smo143134 No alias Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
Spa_g16769 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Tin_g00638 No alias component *(uL1c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e031570_P001 Zm00001e031570 component psRPL1 of large ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 163 353
No external refs found!