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  5. Ore_g28473

Ore_g28473


Description : protein involved in PS-II assembly *(HHL1) & original description: none


Gene families : OG0006939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g28473

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00073250 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
AT1G67700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
Adi_g033649 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Aev_g03714 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g07520 No alias protein involved in PS-II assembly *(HHL1) & original... 0.08 OrthoFinder output from all 47 species
Als_g00467 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g06998 No alias protein involved in PS-II assembly *(HHL1) & original... 0.06 OrthoFinder output from all 47 species
Aop_g06739 No alias protein involved in PS-II assembly *(HHL1) & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0531.g075832 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g10861 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G086100.1 Ceric.07G086100 protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.126 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre03.g146167 No alias Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Dac_g16635 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g31028 No alias protein involved in PS-II assembly *(HHL1) & original... 0.1 OrthoFinder output from all 47 species
Dde_g43832 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04373 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01010306001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Gb_36498 No alias HHL1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
LOC_Os02g38820.1 LOC_Os02g38820 HHL1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Len_g53688 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g05888 No alias protein involved in PS-II assembly *(HHL1) & original... 0.07 OrthoFinder output from all 47 species
MA_99789g0010 No alias HHL1 protein involved in PS-II assembly 0.1 OrthoFinder output from all 47 species
Mp4g20930.1 No alias HHL1 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Msp_g02701 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g12181 No alias protein involved in PS-II assembly *(HHL1) & original... 0.08 OrthoFinder output from all 47 species
Pir_g13350 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g10877 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g54816 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g09632 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Solyc05g014310.3.1 Solyc05g014310 HHL1 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Spa_g52699 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e015029_P001 Zm00001e015029 HHL1 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR045388 HHL1-like 48 220
No external refs found!