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  5. Ore_g28947

Ore_g28947 (CYCP4;1)


Aliases : CYCP4;1

Description : regulatory protein *(CYCP(CYCU) of cell cycle & original description: none


Gene families : OG0000303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g28947
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT2G44740 CYCP4;1 cyclin p4;1 0.03 OrthoFinder output from all 47 species
AT2G45080 cycp3;1 cyclin p3;1 0.01 OrthoFinder output from all 47 species
AT3G05327 No alias Cyclin family protein 0.02 OrthoFinder output from all 47 species
AT3G63120 CYCP1;1 cyclin p1;1 0.05 OrthoFinder output from all 47 species
AT5G07450 CYCP4;3 cyclin p4;3 0.03 OrthoFinder output from all 47 species
Adi_g006736 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Adi_g019195 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Adi_g059021 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aev_g12842 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g03971 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ala_g15122 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Ala_g16985 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ala_g25698 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ala_g36160 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g02320 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g04798 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Als_g13537 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Als_g21897 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Als_g37867 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aob_g04277 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aob_g07900 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g00597 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g11744 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aop_g14532 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g37367 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38865.t1 CYCP3;2, Aspi01Gene38865 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51759.t1 CYCP4;1, Aspi01Gene51759 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene58408.t1 CYCP2;1, Aspi01Gene58408 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0056.g034223 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0060.g034840 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g07393 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Cba_g12754 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G089000.1 CYCP3;2, Ceric.07G089000 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.10G034800.1 CYCP2;1, Ceric.10G034800 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.31G015200.1 CYCP3;2, Ceric.31G015200 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dac_g02043 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dac_g04053 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Dac_g21403 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dac_g21404 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Dcu_g07480 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Dde_g02131 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dde_g07807 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dde_g12405 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ehy_g05568 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ehy_g06469 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01018166001 cycp3;1 Cell cycle.regulation.cyclins.CYCP-type cyclin 0.02 OrthoFinder output from all 47 species
Gb_27223 CYCP3;2 cyclin (CYCP) 0.05 OrthoFinder output from all 47 species
Gb_39399 CYCP4;1 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g03294.1 CYCP4;1, LOC_Os02g03294 cyclin (CYCP) 0.08 OrthoFinder output from all 47 species
LOC_Os04g46660.1 cycp3;1, LOC_Os04g46660 cyclin (CYCP) 0.06 OrthoFinder output from all 47 species
LOC_Os10g41430.1 CYCP4;1, LOC_Os10g41430 cyclin (CYCP) 0.05 OrthoFinder output from all 47 species
Len_g01157 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Len_g01797 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g03235 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Lfl_g00807 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Lfl_g16742 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Lfl_g35971 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
MA_10435168g0020 CYCP3;2 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species
MA_57087g0010 cycp3;1 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
MA_80306g0010 CYCP4;1 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
MA_92793g0010 cycp3;1 cyclin (CYCP) 0.01 OrthoFinder output from all 47 species
Msp_g00510 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Msp_g12348 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Nbi_g12273 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Pir_g09300 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Pir_g16206 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Pir_g44109 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ppi_g07325 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ppi_g29737 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g62553 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026066 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sam_g16477 No alias regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Solyc01g090800.3.1 CYCP3;2, Solyc01g090800 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
Solyc03g093790.3.1 CYCP4;1, Solyc03g093790 cyclin (CYCP) 0.07 OrthoFinder output from all 47 species
Solyc09g065200.4.1 CYCP1;1, Solyc09g065200 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
Spa_g07670 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Spa_g12295 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Spa_g12296 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g16879 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Spa_g29004 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Spa_g30570 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Spa_g39175 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g39740 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g47429 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Tin_g19076 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Tin_g27209 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Tin_g28471 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Zm00001e007314_P001 cycp3;1, Zm00001e007314 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
Zm00001e007371_P002 CYCP4;3, Zm00001e007371 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEA Interproscan
MF GO:0019901 protein kinase binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013922 Cyclin_PHO80-like 51 157
No external refs found!