Ore_g29069 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29069

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
Adi_g002819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g043352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085510 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106085 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g113540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12943 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04425 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27561 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02394.t1 Aspi01Gene02394 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22334.t1 Aspi01Gene22334 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36735.t1 Aspi01Gene36735 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011298 No alias not classified & original description: CDS=1-2325 0.02 OrthoFinder output from all 47 species
Azfi_s0125.g048584 CRR22 not classified & original description: CDS=1-1611 0.03 OrthoFinder output from all 47 species
Cba_g03367 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07175 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07743 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17193 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37893 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G103900.1 Ceric.04G103900 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.09G059800.1 Ceric.09G059800 not classified & original description: pacid=50588067... 0.04 OrthoFinder output from all 47 species
Ceric.11G009800.1 Ceric.11G009800 not classified & original description: pacid=50594985... 0.02 OrthoFinder output from all 47 species
Ceric.19G003900.1 Ceric.19G003900 not classified & original description: pacid=50575192... 0.03 OrthoFinder output from all 47 species
Dac_g05750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43249 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05563 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07665 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09208 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04950 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005577001 EMB2261 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44210.2 LOC_Os03g44210 RNA editing factor (SEL1/PDM1) 0.02 OrthoFinder output from all 47 species
LOC_Os04g09530.1 LOC_Os04g09530 RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species
Len_g03894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04367 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19657 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41131 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48712 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02558 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06978 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33680 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g47021 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04533 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53029 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53705 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026492 No alias not classified & original description: CDS=48-2072 0.02 OrthoFinder output from all 47 species
Sam_g10509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56147 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06098 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06463 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07561 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08535 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 461 485
IPR046848 E_motif 505 549
IPR002885 Pentatricopeptide_repeat 285 333
IPR002885 Pentatricopeptide_repeat 184 232
IPR002885 Pentatricopeptide_repeat 83 132
IPR002885 Pentatricopeptide_repeat 386 434
No external refs found!