Ore_g29227


Description : regulatory protein *(TMS) of vesicle trafficking & original description: none


Gene families : OG0002049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29227

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00123180 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G05570 No alias transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
Adi_g083853 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Aob_g10691 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Aob_g25755 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Aop_g61502 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Ceric.04G073600.1 Ceric.04G073600 regulatory protein *(TMS) of vesicle trafficking &... 0.05 OrthoFinder output from all 47 species
Dac_g31029 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Dcu_g05823 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Dde_g04947 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
GSVIVT01011173001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01032802001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os07g49300.1 LOC_Os07g49300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g02377 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Mp8g09160.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g34466 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g06999 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Sam_g08073 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Smo413341 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc09g005600.3.1 Solyc09g005600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035944_P002 Zm00001e035944 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!