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  5. Ore_g29239

Ore_g29239


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29239
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00160510 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G58450 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g04344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28485.t1 Aspi01Gene28485 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29654.t1 Aspi01Gene29654 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37518.t1 Aspi01Gene37518 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55688.t1 Aspi01Gene55688 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59960.t1 Aspi01Gene59960 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G013300.1 Ceric.04G013300 not classified & original description: pacid=50631698... 0.03 OrthoFinder output from all 47 species
Ceric.07G000800.1 Ceric.07G000800 not classified & original description: pacid=50627155... 0.02 OrthoFinder output from all 47 species
Dac_g20809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20927 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35958 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022496001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028109001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_05132 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_20771 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g63010.1 LOC_Os01g63010 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100052g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10426703g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10437265g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_61335g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7063g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g02950.1 No alias Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g07493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo79236 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g079410.2.1 Solyc02g079410 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e005689_P006 Zm00001e005689 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016001_P001 Zm00001e016001 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003796 lysozyme activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006027 glycosaminoglycan catabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009253 peptidoglycan catabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 7 156
IPR006016 UspA 171 323
No external refs found!