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  5. Ore_g29294

Ore_g29294 (OTP84)


Aliases : OTP84

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29294
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00124250 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
Adi_g033266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034782 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096243 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17512 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06621 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06903 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27916 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28005 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028154001 No alias Pentatricopeptide repeat-containing protein At2g35030,... 0.03 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_00360 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_27491 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
LOC_Os01g74600.1 CRR22, LOC_Os01g74600 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Lfl_g05478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_184088g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.04 OrthoFinder output from all 47 species
Msp_g17134 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17690 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34228 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05327 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g35238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05347 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g05580 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15676 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g17400 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18087 OTP84 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g22406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22790 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27204 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29795 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30729 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g40648 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43122 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g44325 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g45444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11830 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04435 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12264 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22807 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05208 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012420 No alias not classified & original description: CDS=519-2384 0.02 OrthoFinder output from all 47 species
Smo92610 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.03 OrthoFinder output from all 47 species
Solyc07g062820.1.1 Solyc07g062820 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Spa_g57153 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 70
IPR002885 Pentatricopeptide_repeat 239 286
IPR032867 DYW_dom 455 546
IPR002885 Pentatricopeptide_repeat 113 139
IPR002885 Pentatricopeptide_repeat 315 338
IPR002885 Pentatricopeptide_repeat 141 171
IPR046848 E_motif 358 419
No external refs found!