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  5. Ore_g30168

Ore_g30168 (AGO1)


Aliases : AGO1

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30168
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00171480 AGO7, ZIP,... Protein argonaute 7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT2G27880 AGO5 Argonaute family protein 0.02 OrthoFinder output from all 47 species
AT5G21150 AGO9 Argonaute family protein 0.03 OrthoFinder output from all 47 species
Adi_g017777 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088499 AGO1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g113326 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Aev_g02523 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33064 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Als_g09329 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Aob_g04459 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29180.t1 AGO1, Aspi01Gene29180 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35022.t1 AGO1, Aspi01Gene35022 siRNA-binding factor *(AGO2) of non-canonical RdDM... 0.02 OrthoFinder output from all 47 species
Cba_g16425 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Dac_g09447 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33091 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Dcu_g18764 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Ehy_g18181 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
GSVIVT01029383001 AGO1 Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
LOC_Os02g58490.1 AGO1, LOC_Os02g58490 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Len_g59218 AGO9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427005g0010 AGO7, ZIP siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.04 OrthoFinder output from all 47 species
MA_118377g0010 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
MA_161177g0010 AGO7, ZIP Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp1g18110.1 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.05 OrthoFinder output from all 47 species
Pir_g52026 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007503 AGO1 not classified & original description: CDS=68-2746 0.02 OrthoFinder output from all 47 species
Sam_g08413 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Smo110151 AGO1 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
Solyc01g010970.3.1 AGO7, ZIP, Solyc01g010970 Protein argonaute 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g51306 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007233_P001 AGO1, Zm00001e007233 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003100 PAZ_dom 493 563
IPR014811 ArgoL1 420 468
IPR032474 Argonaute_N 278 410
No external refs found!