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  5. Ore_g30249

Ore_g30249 (emb2734)


Aliases : emb2734

Description : nucleocytoplasmic import karyopherin *(IMB3) & original description: none


Gene families : OG0001766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001766_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30249
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Adi_g113023 emb2734 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11168 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Als_g38445 emb2734 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03545 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene44474.t1 emb2734, Aspi01Gene44474 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Cba_g25003 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G003600.1 emb2734, Ceric.17G003600 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.04 OrthoFinder output from all 47 species
Ceric.21G047300.1 emb2734, Ceric.21G047300 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G014000.1 emb2734, Ceric.26G014000 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g04981 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g12588 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01025460001 emb2734 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Lfl_g06735 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
MA_10432206g0010 emb2734 IMB3 nucleocytoplasmic import karyopherin 0.02 OrthoFinder output from all 47 species
Nbi_g09038 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.02 OrthoFinder output from all 47 species
Ore_g23065 emb2734 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g34554 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.05 OrthoFinder output from all 47 species
Sam_g16162 No alias nucleocytoplasmic import karyopherin *(IMB3) & original... 0.03 OrthoFinder output from all 47 species
Smo140234 emb2734 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Tin_g21538 emb2734 nucleocytoplasmic import karyopherin *(IMB3) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e035335_P001 emb2734, Zm00001e035335 IMB3 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR041653 Importin_rep_4 285 377
IPR041389 Importin_rep_6 786 893
IPR000357 HEAT 926 954
No external refs found!