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  5. Ore_g30884

Ore_g30884 (SNP33, SNAP33,...)


Aliases : SNP33, SNAP33, ATSNAP33B, ATSNAP33

Description : Qbc-type SNAP25-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002168_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30884

Target Alias Description ECC score Gene Family Method Actions
AT1G13890 SNAP30, ATSNAP30 soluble N-ethylmaleimide-sensitive factor adaptor protein 30 0.02 OrthoFinder output from all 47 species
Ala_g12150 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Als_g01726 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Azfi_s0117.g046599 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0359.g066869 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dac_g23619 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
GSVIVT01007921001 SNP33, SNAP33,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Gb_35935 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.04 OrthoFinder output from all 47 species
Len_g18513 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Msp_g16186 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Pir_g09555 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Solyc06g069570.3.1 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!