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  5. Ore_g31025

Ore_g31025


Description : not classified & original description: none


Gene families : OG0002687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g31025

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00201p00015360 evm_27.TU.AmTr_v1... Cold shock protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g010356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G054200.1 Ceric.28G054200 not classified & original description: pacid=50571012... 0.02 OrthoFinder output from all 47 species
Solyc10g054330.3.1 Solyc10g054330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 203 220
IPR001878 Znf_CCHC 186 201
IPR001878 Znf_CCHC 121 137
IPR001878 Znf_CCHC 255 271
IPR001878 Znf_CCHC 103 118
IPR001878 Znf_CCHC 223 238
IPR001878 Znf_CCHC 140 155
IPR001878 Znf_CCHC 274 290
No external refs found!