1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g31682

Ore_g31682 (ATH5, ATTRX5, TRX5, LIV1)


Aliases : ATH5, ATTRX5, TRX5, LIV1

Description : H-type thioredoxin *(Trx-H) & original description: none


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g31682
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Adi_g072003 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079107 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31993 ATTRX4, ATH4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34480 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51031 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20084 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29931 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g34058 ATTRX3, ATTRXH3,... H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g34906 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g55382 No alias H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g52013 TRXH2, TRX2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g55894 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g63046 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g64629 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25340 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29404 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31088 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g34320 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g52068 TRXH2, TRX2,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g53147 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g53408 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34873 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37103 PDI10, PDIL2-2,... H-type thioredoxin *(Trx-H) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37991 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37992 ATTRX3, ATTRXH3,... H-type thioredoxin *(Trx-H) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39613 ATTRX1, ATTRX H1, TRX1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39922 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g32711 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g40531 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g41107 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g24718 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g23821 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g35975 ATPDI6,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g36729 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g37942 ATTRX1, ATTRX H1, TRX1 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 35 124
No external refs found!