Aliases : GR-RBP3
Description : RNA editing factor *(ORRM3) & original description: none
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g33178 | |
| Cluster | HCCA: Cluster_108 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g013366 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034694 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g12373 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g28477 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g24232 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27479 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cre17.g729150 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g06304 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06280 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g12830 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_37522 | No alias | Organelle RRM domain-containing protein 1, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g47800.1 | ATRZ-1A, LOC_Os03g47800 | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g23738 | No alias | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g05645 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g05591 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021985 | GR-RBP3 | not classified & original description: CDS=185-544 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g38660 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011440_P001 | Zm00001e011440 | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028502_P003 | Zm00001e028502 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006284 | base-excision repair | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 41 | 111 |
| No external refs found! |
