1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g33910

Ore_g33910


Description : subunit zeta *(CCT6) of CCT chaperonin folding complex & original description: none


Gene families : OG0003995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003995_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g33910

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00116290 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00016450 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
AT3G02530 No alias TCP-1/cpn60 chaperonin family protein 0.05 OrthoFinder output from all 47 species
AT5G16070 No alias TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from all 47 species
Adi_g117522 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Aev_g21281 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Aop_g03812 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Ceric.16G067100.1 Ceric.16G067100 subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.37 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Cre09.g397200 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
Dac_g39546 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g14364 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
GSVIVT01031067001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
Gb_18443 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
LOC_Os05g05470.1 LOC_Os05g05470 CCT6 subunit zeta of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Lfl_g01847 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.03 OrthoFinder output from all 47 species
MA_8438g0020 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
MA_94211g0010 No alias T-complex protein 1 subunit zeta 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp8g07530.1 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Msp_g10126 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.04 OrthoFinder output from all 47 species
Nbi_g06183 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Pp3c11_26000V3.1 Pp3c11_26000 TCP-1/cpn60 chaperonin family protein 0.01 OrthoFinder output from all 47 species
Sam_g06491 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Sam_g37510 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.02 OrthoFinder output from all 47 species
Smo158120 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Solyc02g063090.3.1 Solyc02g063090 CCT6 subunit zeta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Solyc02g085790.3.1 Solyc02g085790 CCT6 subunit zeta of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Spa_g18568 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Spa_g18569 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e010996_P001 Zm00001e010996 CCT6 subunit zeta of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 29 528
No external refs found!