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  5. Ore_g34327

Ore_g34327


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g34327
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00181560 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00153950 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
AMTR_s00009p00268260 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00259620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g35030,... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00145640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00058270 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00166950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g14730... 0.02 OrthoFinder output from all 47 species
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AT1G16480 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G74600 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g054888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087380 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g105303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23888 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40066 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42177 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17265 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18507 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19004 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23879 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55180 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11079 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26948 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30469 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07902 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13687 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27035 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g31625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g57040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34799.t1 Aspi01Gene34799 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060212 CRR22 not classified & original description: CDS=1-2343 0.05 OrthoFinder output from all 47 species
Azfi_s0261.g060752 CRR22 not classified & original description: CDS=1-1500 0.04 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.07 OrthoFinder output from all 47 species
Cba_g03375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17225 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34897 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36325 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g43653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45697 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g59978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g71783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g73650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G077400.1 Ceric.18G077400 not classified & original description: pacid=50622022... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g16781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07044 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08508 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08881 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02203 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10387 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25197 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46917 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26370 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00776 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.03 OrthoFinder output from all 47 species
Gb_33328 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Len_g20208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06223 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06643 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07684 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g35187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g41072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22512 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35017 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01285 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01775 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g03367 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05347 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g08923 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12555 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12878 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19780 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g20201 EMB2261 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g23513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g45444 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Pir_g07049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12166 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53555 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55034 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015571 No alias not classified & original description: CDS=1-1581 0.02 OrthoFinder output from all 47 species
Sam_g06616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
Solyc06g053850.4.1 Solyc06g053850 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Spa_g02187 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30016 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05979 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09254 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09309 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29866 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35104 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.04 OrthoFinder output from all 47 species
Zm00001e032679_P001 Zm00001e032679 RNA editing factor (OTP80) 0.02 OrthoFinder output from all 47 species
Zm00001e035764_P001 Zm00001e035764 Pentatricopeptide repeat-containing protein At2g34400... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 802 826
IPR002885 Pentatricopeptide_repeat 702 724
IPR002885 Pentatricopeptide_repeat 298 322
IPR002885 Pentatricopeptide_repeat 223 269
IPR002885 Pentatricopeptide_repeat 424 471
IPR002885 Pentatricopeptide_repeat 729 774
IPR002885 Pentatricopeptide_repeat 626 674
IPR002885 Pentatricopeptide_repeat 121 169
IPR002885 Pentatricopeptide_repeat 323 371
IPR002885 Pentatricopeptide_repeat 525 572
No external refs found!