Ore_g34794 (ABCG40, PDR12,...)

Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g34794

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00122p00120860	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Adi_g014210	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene02131.t1	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene43685.t1	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g24516	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Mp8g13070.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Solyc08g067620.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Spa_g56174	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g57099	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g24868	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	405	617
IPR043926	ABCG_dom	288	346
IPR003439	ABC_transporter-like_ATP-bd	107	259

External Links

No external refs found!