1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g35997

Ore_g35997 (TUB6)


Aliases : TUB6

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g35997

Target Alias Description ECC score Gene Family Method Actions
Aev_g20344 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
MA_10431251g0010 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder output from all 47 species
MA_251404g0010 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
MA_44957g0020 TUB8 Tubulin beta-3 chain OS=Triticum aestivum... 0.04 OrthoFinder output from all 47 species
MA_8465279g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 126.0) 0.01 OrthoFinder output from all 47 species
Pnu_g06209 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Pnu_g31777 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 2 65
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 115 236
No external refs found!