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  5. Ore_g36845

Ore_g36845


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g36845

Target Alias Description ECC score Gene Family Method Actions
Als_g18257 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50192 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09047 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48921.t1 AT-GTL1, GTL1,... Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene54632.t1 Aspi01Gene54632 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15467 AT-GTL1, GTL1, AT-GTL2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25631 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G053100.1 Ceric.26G053100 Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03068 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13171 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39560 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08505 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12622 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24778 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Gb_31300 No alias transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Ore_g08779 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27740 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018240 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g31947 No alias Trihelix-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e000092_P003 AT-GTL1, GTL1,... transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Zm00001e007383_P001 Zm00001e007383 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 232 319
No external refs found!