Aliases : GR-RBP4, GRP4
Description : not classified & original description: none
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g37912 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G04280 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g121412 | GR-RBP4, GRP4 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38249 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g35268 | CCR2, ATGRP7,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene62878.t1 | GRP2, ATGRP2,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71155.t1 | Aspi01Gene71155 | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0136.g050935 | GRP2, ATGRP2, GR-RBP2 | not classified & original description: CDS=1-543 | 0.02 | OrthoFinder output from all 47 species | |
| Gb_24306 | CCR2, ATGRP7,... | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g06168 | CCR2, ATGRP7,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_58957g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_9594430g0010 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g27813 | GR-RBP4, GRP4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g08398 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 5 | 75 |
| No external refs found! |
