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  5. Ore_g39678

Ore_g39678


Description : component *(eS21) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0004049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g39678
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT3G53890 No alias Ribosomal protein S21e 0.03 OrthoFinder output from all 47 species
Aop_g23096 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre03.g203450 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g35214 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01017756001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Gb_27652 No alias component RPS21 of SSU proteome 0.03 OrthoFinder output from all 47 species
Gb_35516 No alias component RPS21 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_73657g0010 No alias component RPS21 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp4g22150.1 No alias component RPS21 of SSU proteome 0.04 OrthoFinder output from all 47 species
Pp3c26_3000V3.1 Pp3c26_3000 Ribosomal protein S21e 0.03 OrthoFinder output from all 47 species
Sam_g07802 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g19976 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e011684_P002 Zm00001e011684 component RPS21 of SSU proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 21 99
No external refs found!