Ore_g42049


Description : not classified & original description: none


Gene families : OG0004526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004526_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g42049

Target Alias Description ECC score Gene Family Method Actions
Cre17.g742200 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g26653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009847001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g05581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10358489g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_20218g0010 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ppi_g03042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo109857 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Zm00001e041860_P003 Zm00001e041860 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 73 121
IPR000408 Reg_chr_condens 126 171
IPR000408 Reg_chr_condens 244 296
IPR000408 Reg_chr_condens 181 241
No external refs found!