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  5. Ore_g42250

Ore_g42250


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g42250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00252630 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AT2G41190 No alias Transmembrane amino acid transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G09330 No alias Transmembrane amino acid transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G09340 No alias Transmembrane amino acid transporter family protein 0.02 OrthoFinder output from all 47 species
Aop_g68476 No alias solute transporter *(AAAP) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24740.t1 Aspi01Gene24740 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46053.t1 Aspi01Gene46053 solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G055400.1 Ceric.04G055400 not classified & original description: pacid=50630661... 0.02 OrthoFinder output from all 47 species
Ceric.38G016600.1 Ceric.38G016600 solute transporter *(AAAP) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.8 No alias Amino acid transporter AVT1B OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dde_g26363 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011400001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01019976001 No alias Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
GSVIVT01020258001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01020261001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01034218001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g41420.1 LOC_Os01g41420 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
MA_10430942g0010 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_131191g0010 No alias solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
MA_17204g0020 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g14120.1 No alias solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Msp_g09047 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017544 No alias solute transporter *(AAAP) & original description: CDS=512-1906 0.03 OrthoFinder output from all 47 species
Solyc06g061270.2.1 Solyc06g061270 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Spa_g48860 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52548 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 90 462
No external refs found!