Ore_g42518 (OPCL1)


Aliases : OPCL1

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g42518
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G20490 No alias AMP-dependent synthetase and ligase family protein 0.09 OrthoFinder output from all 47 species
Ala_g08035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34196.t1 OPCL1, Aspi01Gene34196 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01385 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011541001 No alias 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01016171001 OPCL1 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Gb_18693 OPCL1 OPC-8:CoA synthetase 0.04 OrthoFinder output from all 47 species
Gb_24034 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_135674g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g09388 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10312 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo268211 OPCL1 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g46255 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 47 453
IPR025110 AMP-bd_C 462 537
No external refs found!