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  5. Ore_g43390

Ore_g43390


Description : not classified & original description: none


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g43390

Target Alias Description ECC score Gene Family Method Actions
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Als_g57900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27928.t1 Aspi01Gene27928 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36775.t1 Aspi01Gene36775 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_38709 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.02 OrthoFinder output from all 47 species
LOC_Os01g40070.1 LOC_Os01g40070 Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51520.1 LOC_Os05g51520 Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g00629 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g062680.1.1 Solyc08g062680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g009000.1.1 Solyc12g009000 Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g07912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 34 174
No external refs found!