Aliases : LBD22
Description : AS2/LOB-type transcription factor & original description: none
Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g43402 | |
| Cluster | HCCA: Cluster_42 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00227160 | LBD15, ASL11,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00058p00148530 | LBD11,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g29995 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g09772 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene15025.t1 | LBD19, Aspi01Gene15025 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39794 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46319 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_19720 | LBD27, SCP | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g07270.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16017 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_108847g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_113501g0010 | LBD12, ASL5, PCK1 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_126761g0010 | LBD20 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_19148g0010 | LBD11 | transcription factor (AS2/LOB) | 0.01 | OrthoFinder output from all 47 species | |
| MA_41152g0010 | LBD4 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_84752g0010 | LBD15, ASL11 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g00650.1 | ASL1, LBD36 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g44922 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g40723 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g43401 | No alias | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g21903 | LBD22 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g22342 | LBD27, SCP | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g24707 | LBD22 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g09676 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0186.g025054 | LBD20 | AS2/LOB-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g091420.2.1 | LBD18, Solyc01g091420 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g048740.3.1 | LBD11, Solyc05g048740 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005215_P001 | LBD4, Zm00001e005215 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031510_P001 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 46 | 143 |
| No external refs found! |
