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  5. Ore_g43423

Ore_g43423 (CCR1, GR-RBP8, GRP8, ATGRP8)


Aliases : CCR1, GR-RBP8, GRP8, ATGRP8

Description : not classified & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g43423

Target Alias Description ECC score Gene Family Method Actions
AT1G18630 GR-RBP6 glycine-rich RNA-binding protein 6 0.03 OrthoFinder output from all 47 species
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.02 OrthoFinder output from all 47 species
Adi_g006714 GR-RBP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g24836 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g00500 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25566 CCR1, GR-RBP8,... RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02645 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02744 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435321g0010 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
MA_10436424g0010 ATRZ-1A RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Mp1g21200.1 GRP2, ATGRP2, GR-RBP2 RNA editing factor (ORRM) 0.05 OrthoFinder output from all 47 species
Nbi_g09818 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_6610V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g23364 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20439 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 1 51
No external refs found!