1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g43955

Ore_g43955


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g43955
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00116p00025230 evm_27.TU.AmTr_v1... Probable pectinesterase 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G36710 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G19730 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g16363 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02833 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32641 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25292 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05795.t1 Aspi01Gene05795 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07316.t2 VGDH1, Aspi01Gene07316 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07325.t1 Aspi01Gene07325 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59342.t1 Aspi01Gene59342 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59344.t1 Aspi01Gene59344 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59346.t1 Aspi01Gene59346 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59354.t1 Aspi01Gene59354 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008131 No alias pectin methylesterase & original description: CDS=1-870 0.03 OrthoFinder output from all 47 species
Ceric.10G069000.1 Ceric.10G069000 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.37G019300.1 Ceric.37G019300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G035900.1 Ceric.39G035900 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16825 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g28954 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g44261 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01023786001 ATPE11, PE11 Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_27225 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g53990.1 LOC_Os01g53990 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os04g46740.1 LOC_Os04g46740 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Len_g56779 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428610g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_112715g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_181657g0020 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_19196g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_304854g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_40503g0010 ATPE11, PE11 pectin methylesterase 0.01 OrthoFinder output from all 47 species
MA_99816g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp4g01190.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Msp_g42451 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27443 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43683 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02205 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21379 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11138 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091 No alias pectin methylesterase & original description: CDS=1-882 0.02 OrthoFinder output from all 47 species
Solyc01g079180.4.1 Solyc01g079180 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc04g080530.3.1 ATPE11, PE11,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Spa_g47305 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029074_P001 Zm00001e029074 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 49 338
No external refs found!