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  5. Ore_g44021

Ore_g44021 (GRP2, ATGRP2, GR-RBP2)


Aliases : GRP2, ATGRP2, GR-RBP2

Description : RNA editing factor *(ORRM3) & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g44021
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00132070 ATRZ-1A,... Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00154p00024620 GR-RBP3,... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AT5G54580 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
Adi_g022151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058531 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04517 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07993 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031234 No alias not classified & original description: CDS=60-764 0.03 OrthoFinder output from all 47 species
Cba_g31532 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12851 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07272 CCR2, ATGRP7,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g29374 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g31219 No alias RNA chaperone *(RZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03416 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04318 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g104840.4.1 ATRZ-1A, Solyc01g104840 RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Spa_g10567 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12557 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22222 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24518 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00653 GR-RBP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27808 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033010_P001 Zm00001e033010 RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Zm00001e035491_P001 GR-RBP5, Zm00001e035491 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 41 110
No external refs found!