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  5. Ore_g44325

Ore_g44325


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g44325
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00182540 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00156450 REME1,... Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00124250 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G33760 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.03 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G40410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36018 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13883.t1 Aspi01Gene13883 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28263.t1 CRR22, Aspi01Gene28263 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34785.t1 Aspi01Gene34785 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0125.g048584 CRR22 not classified & original description: CDS=1-1611 0.05 OrthoFinder output from all 47 species
Cba_g04966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35153 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g72718 MEF21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_05554 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_26571 OTP84 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Gb_28390 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Gb_33210 OTP84 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
LOC_Os01g42280.1 CRR21, LOC_Os01g42280 RNA editing factor (CRR21) 0.04 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.03 OrthoFinder output from all 47 species
LOC_Os01g62910.1 CRR2, LOC_Os01g62910 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66160.1 REME1, LOC_Os01g66160 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27339 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54937 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_43615g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34228 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06876 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01302 REME1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g01775 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g02832 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g03029 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g03774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05130 OTP82 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g05131 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06559 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g07471 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08807 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Ore_g09754 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12878 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g15027 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g15736 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g16060 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g17400 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g18087 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g19659 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g20147 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g20201 EMB2261 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g20604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21891 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g22790 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g22808 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g22972 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g23126 EMB2261 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g24617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26158 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26218 REME1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g27204 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29294 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g29795 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30445 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30729 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32012 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g32185 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33192 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g33384 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g34171 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g36479 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g39910 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40648 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g41140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41882 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42269 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g42856 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43973 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22160 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001740 No alias not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010845 No alias not classified & original description: CDS=1-381 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015021 No alias not classified & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Smo134463 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Spa_g07138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14323 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53369 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003284_P001 Zm00001e003284 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e012607_P002 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Zm00001e016923_P001 CRR2, Zm00001e016923 Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
Zm00001e023333_P001 Zm00001e023333 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e024311_P001 Zm00001e024311 Pentatricopeptide repeat-containing protein At1g09410,... 0.03 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
Zm00001e029450_P001 Zm00001e029450 Pentatricopeptide repeat-containing protein At2g46050,... 0.04 OrthoFinder output from all 47 species
Zm00001e030831_P001 Zm00001e030831 Pentatricopeptide repeat-containing protein At3g20730... 0.02 OrthoFinder output from all 47 species
Zm00001e030887_P001 Zm00001e030887 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.02 OrthoFinder output from all 47 species
Zm00001e035764_P001 Zm00001e035764 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 166 188
IPR002885 Pentatricopeptide_repeat 266 290
IPR002885 Pentatricopeptide_repeat 192 238
IPR002885 Pentatricopeptide_repeat 90 137
No external refs found!