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Ore_g44911 (APUM12, PUM12)


Aliases : APUM12, PUM12

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g44911

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00178160 PUM7, APUM7,... Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g058334 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23704.t1 APUM12, PUM12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37289.t1 APUM12, PUM12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026500 APUM12, PUM12 not classified & original description: CDS=1-2874 0.02 OrthoFinder output from all 47 species
Len_g13938 PUM7, APUM7 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 486 506
IPR001313 Pumilio_RNA-bd_rpt 885 904
IPR001313 Pumilio_RNA-bd_rpt 625 658
IPR001313 Pumilio_RNA-bd_rpt 809 826
IPR001313 Pumilio_RNA-bd_rpt 660 693
IPR001313 Pumilio_RNA-bd_rpt 698 730
IPR001313 Pumilio_RNA-bd_rpt 736 766
IPR001313 Pumilio_RNA-bd_rpt 844 877
IPR001313 Pumilio_RNA-bd_rpt 771 804
No external refs found!