Ore_g45249


Description : not classified & original description: none


Gene families : OG0004217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004217_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g45249
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00105130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g019542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12438 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g06115 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g18936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23776 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.17G081100.1 Ceric.17G081100 not classified & original description: pacid=50617968... 0.03 OrthoFinder output from all 47 species
Dac_g11246 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g11988 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_15857 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g03670.1 LOC_Os03g03670 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g09577 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g09580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_19510V3.1 Pp3c17_19510 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g23476 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g14431 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo81134 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc10g074580.2.1 Solyc10g074580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g08584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29084 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e000224_P001 Zm00001e000224 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!