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  4. Sequence
  5. Spa_g00165

Spa_g00165


Description : not classified & original description: none


Gene families : OG0001793 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001793_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g00165

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene64520.t1 Aspi01Gene64520 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026539_P001 Zm00001e026539 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!