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  5. Spa_g00268

Spa_g00268 (EXP15, ATEXPA15,...)


Aliases : EXP15, ATEXPA15, ATHEXP ALPHA 1.3, ATEXP15, EXPA15

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g00268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00077570 ATEXPA4, ATEXP4,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 OrthoFinder output from all 47 species
AT4G38210 ATEXPA20,... expansin A20 0.05 OrthoFinder output from all 47 species
AT4G38400 ATEXPL2, EXPL2,... expansin-like A2 0.01 OrthoFinder output from all 47 species
Adi_g007338 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g124631 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g21493 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g32812 ATEXPA10,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g33159 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00389.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene14225.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene52606.t1 EXPB3, ATEXPB3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0515.g074978 ATEXPA10,... alpha-class expansin & original description: CDS=109-912 0.03 OrthoFinder output from all 47 species
Ceric.05G020100.1 EXPB3, ATEXPB3,... not classified & original description: pacid=50577373... 0.02 OrthoFinder output from all 47 species
Ceric.05G087800.1 ATEXPA10,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.17G039600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g27229 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g14507 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46781 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01008762001 ATEXPA11, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 OrthoFinder output from all 47 species
GSVIVT01024946001 ATEXPA4, ATEXP4,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
LOC_Os02g51040.1 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g39640.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.01 OrthoFinder output from all 47 species
Len_g06473 EXP15, ATEXPA15,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37654 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07225 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11205 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06275 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08562 EXPB3, ATEXPB3,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g30591 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g31444 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004587 ATEXPA10,... alpha-class expansin & original description: CDS=259-1032 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022152 EXPB3, ATEXPB3,... not classified & original description: CDS=169-1023 0.01 OrthoFinder output from all 47 species
Sam_g29879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08942 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007438_P001 EXPB3, ATEXPB3,... beta-class expansin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 159 236
IPR009009 RlpA-like_DPBB 67 147
No external refs found!