Spa_g00372


Description : E3 ubiquitin ligase component *(GID2) of GID ubiquitination complex & original description: none


Gene families : OG0002380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002380_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g00372

Target Alias Description ECC score Gene Family Method Actions
AT4G37880 No alias LisH/CRA/RING-U-box domains-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g058123 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
Adi_g087312 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
Aob_g08311 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.04 OrthoFinder output from all 47 species
Cre11.g467574 No alias Protein RMD5 homolog OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01038533001 No alias Protein RMD5 homolog OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os06g38940.2 LOC_Os06g38940 catalytic component GID2 of ubiquitin protein ligase complex 0.03 OrthoFinder output from all 47 species
Mp5g12080.1 No alias catalytic component GID2 of ubiquitin protein ligase complex 0.03 OrthoFinder output from all 47 species
Ore_g18852 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 150 288
IPR027370 Znf-RING_euk 326 365
No external refs found!