Description : LSU processome maturation factor *(NSA2) & original description: none
Gene families : OG0003771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003771_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00030p00185140 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g013709 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g25334 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0059.g034517 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G100700.1 | Ceric.07G100700 | LSU processome maturation factor *(NSA2) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.12G032400.1 | Ceric.12G032400 | LSU processome maturation factor *(NSA2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g42224 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g54661 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g37110 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g23600.1 | No alias | NSA2 LSU processome maturation factor | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g03462 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g32826 | No alias | LSU processome maturation factor *(NSA2) & original... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005956 | protein kinase CK2 complex | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0019207 | kinase regulator activity | IEP | HCCA |
| MF | GO:0019887 | protein kinase regulator activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1902554 | serine/threonine protein kinase complex | IEP | HCCA |
| CC | GO:1902911 | protein kinase complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022309 | Ribosomal_S8e/biogenesis_NSA2 | 56 | 280 |
| No external refs found! |
