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  5. Spa_g01730

Spa_g01730


Description : LRR-domain extensin & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g01730
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271610 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
Adi_g016368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18679 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38511 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18349 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0726.g083844 No alias not classified & original description: CDS=1-1266 0.02 OrthoFinder output from all 47 species
Cba_g14018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G053400.1 Ceric.15G053400 not classified & original description: pacid=50640042... 0.03 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g13913 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25878 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Gb_26318 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os07g07990.1 LOC_Os07g07990 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
MA_100985g0010 LRX2 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Nbi_g16811 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011513 No alias LRR-domain extensin & original description: CDS=1-1296 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018499 No alias LRR-domain extensin & original description: CDS=1-1542 0.04 OrthoFinder output from all 47 species
Spa_g09054 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 51 83
IPR001611 Leu-rich_rpt 119 176
No external refs found!