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  5. Spa_g01897

Spa_g01897 (RAN1, RAN-1, ATRAN1)


Aliases : RAN1, RAN-1, ATRAN1

Description : GTPase *(Ran) & original description: none


Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g01897
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00135360 RAN1, RAN-1,... Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Als_g05381 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05972 RAN2 GTPase *(Ran) & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g03747 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g51668 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13766.t1 RAN2, Aspi01Gene13766 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08488 RAN2 GTPase *(Ran) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g03631 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02347 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14476 RAN2 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08919 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20602 RAN2 GTPase *(Ran) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18796 RAN2 GTPase *(Ran) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19642 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g19920.1 RAN2 Ran GTPase 0.03 OrthoFinder output from all 47 species
Msp_g03452 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g08065 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11147 RAN2 GTPase *(Ran) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17235 RAN3, ATRAN3 GTPase *(Ran) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04345 RAN1, RAN-1, ATRAN1 GTPase *(Ran) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 11 167
No external refs found!