Spa_g02164


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g02164

Target Alias Description ECC score Gene Family Method Actions
Adi_g003802 SLO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016795 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020545 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104520 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g112132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06300 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26222 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32153 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35750 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16802 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17445 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36381 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g67676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67876 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68696 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g03363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13728 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g24501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30064 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44564 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10429371g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_10430355g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_10432670g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_178429g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_185098g0010 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.05 OrthoFinder output from all 47 species
MA_33151g0010 OTP86 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
MA_3502g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
MA_376862g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_42343g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_501007g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
MA_519985g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.08 OrthoFinder output from all 47 species
MA_56322g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_61422g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_68718g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_9384g0020 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.08 OrthoFinder output from all 47 species
Msp_g19143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26631 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g45692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079260.2.1 Solyc02g079260 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Spa_g08176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14608 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23688 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26827 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45259 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g47236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53265 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53370 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03145 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04707 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05224 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11929 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13689 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g16803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17147 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g17626 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30132 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30416 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30434 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31399 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40280 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43987 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 191 223
IPR002885 Pentatricopeptide_repeat 125 170
IPR002885 Pentatricopeptide_repeat 21 69
IPR002885 Pentatricopeptide_repeat 98 120
IPR046848 E_motif 244 290
No external refs found!