Spa_g02192


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g02192

Target Alias Description ECC score Gene Family Method Actions
AT2G21090 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g019220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07135 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16416 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30819 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61852 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g09030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27916 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34798.t1 Aspi01Gene34798 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0171.g055669 No alias not classified & original description: CDS=1-2286 0.03 OrthoFinder output from all 47 species
Cba_g04668 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04726 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19224 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29991 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34536 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45877 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G043000.1 Ceric.02G043000 not classified & original description: pacid=50585529... 0.04 OrthoFinder output from all 47 species
Ceric.05G087100.1 Ceric.05G087100 not classified & original description: pacid=50579181... 0.04 OrthoFinder output from all 47 species
Ceric.06G014300.1 Ceric.06G014300 not classified & original description: pacid=50620883... 0.04 OrthoFinder output from all 47 species
Ceric.09G023800.1 Ceric.09G023800 not classified & original description: pacid=50587607... 0.04 OrthoFinder output from all 47 species
Ceric.09G062300.1 Ceric.09G062300 not classified & original description: pacid=50587557... 0.03 OrthoFinder output from all 47 species
Ceric.14G013800.1 Ceric.14G013800 not classified & original description: pacid=50633719... 0.04 OrthoFinder output from all 47 species
Ceric.23G042100.1 Ceric.23G042100 not classified & original description: pacid=50611070... 0.04 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.04 OrthoFinder output from all 47 species
Dac_g45607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06828 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11455 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17915 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g18210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18549 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46494 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48025 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50153 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02296 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15898 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21829 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22021 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23994 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24736 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036757001 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
LOC_Os03g56850.1 LOC_Os03g56850 Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
Len_g17706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17734 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19370 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33982 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34019 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39535 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41077 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31283 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008324 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.02 OrthoFinder output from all 47 species
Sam_g51324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 75 122
IPR002885 Pentatricopeptide_repeat 177 225
IPR002885 Pentatricopeptide_repeat 49 71
IPR002885 Pentatricopeptide_repeat 282 306
IPR002885 Pentatricopeptide_repeat 253 275
No external refs found!