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  5. Spa_g02554

Spa_g02554 (PKL, GYM, CHR6, SSL2, CHD3)


Aliases : PKL, GYM, CHR6, SSL2, CHD3

Description : not classified & original description: none


Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g02554

Target Alias Description ECC score Gene Family Method Actions
Adi_g058025 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068298 SYD, CHR3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g082550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38930 PKL, GYM, CHR6,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14150.t2 CHR11, Aspi01Gene14150 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24030.t1 CHR5, Aspi01Gene24030 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene47130.t1 SYD, CHR3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52538.t1 PKL, GYM, CHR6,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene62384.t3 PKR1, CHR4,... CHD3-type chromatin remodeling factor *(PKL/PKR) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene70264.t1 ATCHR12, Aspi01Gene70264 SMARCA component *(SYD/BRM/MINU) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06803 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g06827 PKR1, CHR4 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g33369 CHR5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19433 ATCHR12 SMARCA component *(SYD/BRM/MINU) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02510 CHR5 component *(CHR5) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Ore_g16805 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30961 CHR5 component *(CHR5) of SAGA transcription co-activator... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 39 149
No external refs found!