Description : component *(uS10c) of small plastid ribosomal-subunit proteome & original description: none
Gene families : OG0005087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005087_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g19264 | |
| Cluster | HCCA: Cluster_96 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G13120 | No alias | Ribosomal protein S10p/S20e family protein | 0.06 | OrthoFinder output from all 47 species | |
| Als_g12393 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g01396 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g01016 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g013794 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.34G039900.1 | Ceric.34G039900 | component *(uS10c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Cre03.g195650 | No alias | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g37977 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02308 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g00382 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014640001 | No alias | Protein biosynthesis.organelle translation... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_11573 | No alias | component psRPS10 of small ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g10060.1 | LOC_Os03g10060 | component psRPS10 of small ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
| Len_g05104 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g00728 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10432148g0010 | No alias | component psRPS10 of small ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
| Mp7g14220.1 | No alias | component psRPS10 of small ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g06896 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g28161 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g14839 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c20_8830V3.1 | Pp3c20_8830 | Ribosomal protein S10p/S20e family protein | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c24_19230V3.1 | Pp3c24_19230 | Ribosomal protein S10p/S20e family protein | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g006030.3.1 | Solyc10g006030 | component psRPS10 of small ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g16248 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g54664 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09762 | No alias | component *(uS10c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000789_P001 | Zm00001e000789 | component psRPS10 of small ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004556 | alpha-amylase activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | HCCA |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0016160 | amylase activity | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027486 | Ribosomal_S10_dom | 151 | 245 |
| No external refs found! |
