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  5. Spa_g03247

Spa_g03247 (ATPGP4, PGP4, ABCB4, MDR4)


Aliases : ATPGP4, PGP4, ABCB4, MDR4

Description : not classified & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g03247

Target Alias Description ECC score Gene Family Method Actions
AT1G02520 PGP11 P-glycoprotein 11 0.02 OrthoFinder output from all 47 species
AT4G01830 PGP5 P-glycoprotein 5 0.02 OrthoFinder output from all 47 species
Ala_g16048 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26174 No alias subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Als_g28419 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33230 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02407 PGP20 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g11005 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13591 PGP6 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g38133 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32172.t1 PGP2, Aspi01Gene32172 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42794.t1 ATPGP4, PGP4,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001326 PGP20 subfamily ABCB transporter & original description: CDS=439-4584 0.01 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.01 OrthoFinder output from all 47 species
Cba_g07645 PGP13 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.02G084300.1 ABCB19,... subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g03829 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g10485 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g45466 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08511 PGP11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08658 PGP6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13758 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27838 PGP11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g29870.1 ATPGP4, PGP4,... ABC transporter B family member 7 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Lfl_g21852 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g02494 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37290 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49419 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.01 OrthoFinder output from all 47 species
Ppi_g04001 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014489 PGP6 subfamily ABCB transporter & original description: CDS=1-4245 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021690 ABCB19,... not classified & original description: CDS=77-2374 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0809.g027741 PGP20 subfamily ABCB transporter & original description: CDS=203-3700 0.01 OrthoFinder output from all 47 species
Sam_g27139 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g010310.4.1 PGP20, Solyc04g010310 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Solyc06g009290.4.1 PGP21, Solyc06g009290 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Spa_g18285 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18839 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06138 PGP6 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017444_P002 PGP21, Zm00001e017444 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e041760_P001 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 4 90
No external refs found!