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  5. Spa_g03437

Spa_g03437


Description : not classified & original description: none


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g03437
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT3G58000 No alias VQ motif-containing protein 0.06 OrthoFinder output from all 47 species
Adi_g015010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38883 No alias WRKY33-activating protein *(SIB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g64270 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene12674.t1 Aspi01Gene12674 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46262.t1 Aspi01Gene46262 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72262.t1 Aspi01Gene72262 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G049900.1 Ceric.04G049900 not classified & original description: pacid=50632133... 0.03 OrthoFinder output from all 47 species
Ceric.10G025800.1 Ceric.10G025800 not classified & original description: pacid=50611640... 0.03 OrthoFinder output from all 47 species
Ceric.13G093600.1 Ceric.13G093600 not classified & original description: pacid=50636024... 0.05 OrthoFinder output from all 47 species
Ceric.13G097200.1 Ceric.13G097200 not classified & original description: pacid=50636163... 0.04 OrthoFinder output from all 47 species
Ceric.26G063200.1 Ceric.26G063200 not classified & original description: pacid=50599234... 0.03 OrthoFinder output from all 47 species
Dac_g07235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45144 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001356001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_40688 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g17691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g03890.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15878 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0268.g026986 No alias not classified & original description: CDS=193-879 0.02 OrthoFinder output from all 47 species
Spa_g03596 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030507_P001 Zm00001e030507 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037581_P001 Zm00001e037581 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 1 17
No external refs found!