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  4. Sequence
  5. Spa_g03596

Spa_g03596


Description : not classified & original description: none


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g03596

Target Alias Description ECC score Gene Family Method Actions
AT3G60090 No alias VQ motif-containing protein 0.06 OrthoFinder output from all 47 species
Adi_g044508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12958 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g36583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38883 No alias WRKY33-activating protein *(SIB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40084 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g27858 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g32753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30062 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30392 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g00434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38102 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g67803 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene12674.t1 Aspi01Gene12674 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24473.t1 Aspi01Gene24473 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37551.t1 Aspi01Gene37551 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43876.t1 Aspi01Gene43876 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene46261.t1 Aspi01Gene46261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46262.t1 Aspi01Gene46262 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene58865.t1 Aspi01Gene58865 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene58866.t1 Aspi01Gene58866 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene66306.t1 Aspi01Gene66306 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66312.t1 Aspi01Gene66312 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72262.t1 Aspi01Gene72262 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g30741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g40627 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g42460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G049800.1 Ceric.04G049800 not classified & original description: pacid=50630967... 0.06 OrthoFinder output from all 47 species
Ceric.04G049900.1 Ceric.04G049900 not classified & original description: pacid=50632133... 0.04 OrthoFinder output from all 47 species
Ceric.09G088100.1 Ceric.09G088100 not classified & original description: pacid=50586807... 0.02 OrthoFinder output from all 47 species
Ceric.12G096300.1 Ceric.12G096300 not classified & original description: pacid=50601354... 0.04 OrthoFinder output from all 47 species
Ceric.13G093600.1 Ceric.13G093600 not classified & original description: pacid=50636024... 0.06 OrthoFinder output from all 47 species
Ceric.13G097200.1 Ceric.13G097200 not classified & original description: pacid=50636163... 0.03 OrthoFinder output from all 47 species
Ceric.18G046300.1 Ceric.18G046300 not classified & original description: pacid=50621121... 0.03 OrthoFinder output from all 47 species
Ceric.26G063200.1 Ceric.26G063200 not classified & original description: pacid=50599234... 0.04 OrthoFinder output from all 47 species
Ceric.26G063300.1 Ceric.26G063300 not classified & original description: pacid=50599964... 0.06 OrthoFinder output from all 47 species
Dac_g32573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16494 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g25998 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g51875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02153 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g08114 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g26495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g28880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_122594g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_158473g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_183879g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g03890.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g09843 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g15878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g23495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12467 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g26982 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0268.g026986 No alias not classified & original description: CDS=193-879 0.01 OrthoFinder output from all 47 species
Spa_g03437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030507_P001 Zm00001e030507 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 65 84
No external refs found!