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  5. Spa_g04460

Spa_g04460


Description : component *(uL11) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04460

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00048810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT2G37190 No alias Ribosomal protein L11 family protein 0.03 OrthoFinder output from all 47 species
AT5G60670 No alias Ribosomal protein L11 family protein 0.02 OrthoFinder output from all 47 species
Aop_g06826 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008501 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0279.g062260 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cre12.g528750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g01966 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os02g47140.1 LOC_Os02g47140 component RPL12 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os04g50990.1 LOC_Os04g50990 component RPL12 of LSU proteome component 0.02 OrthoFinder output from all 47 species
MA_10427147g0010 No alias component RPL12 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp3g02020.1 No alias component RPL12 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Msp_g37966 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Nbi_g12624 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c6_19290V3.1 Pp3c6_19290 Ribosomal protein L11 family protein 0.02 OrthoFinder output from all 47 species
Tin_g02995 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 15 69
IPR020783 Ribosomal_L11_C 75 144
No external refs found!