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  5. Spa_g04562

Spa_g04562 (WLIM1)


Aliases : WLIM1

Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04562
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cba_g55644 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g077780.3.1 WLIM1, Solyc04g077780 transcription factor (LIM) 0.04 OrthoFinder output from all 47 species
Solyc10g017520.3.1 Solyc10g017520 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Spa_g52368 WLIM1 LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015234_P001 Zm00001e015234 transcription factor (LIM) 0.01 OrthoFinder output from all 47 species
Zm00001e023098_P001 Zm00001e023098 transcription factor (LIM) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 112 167
IPR001781 Znf_LIM 10 64
No external refs found!