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  5. Spa_g04603

Spa_g04603


Description : CMF transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04603
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.02 OrthoFinder output from all 47 species
Adi_g021795 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g21583 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20729 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0055.g034007 No alias CMF transcription factor & original description: CDS=693-2417 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037937 No alias CMF transcription factor & original description: CDS=1-2013 0.04 OrthoFinder output from all 47 species
Dac_g12836 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20875 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g07785 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species
Len_g28862 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06124 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37830 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24194 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14853 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19039 No alias BBX class-III transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60427 No alias BBX class-III transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023452 No alias BBX class-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g34850 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g20168 No alias BBX class-III transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e012194_P001 Zm00001e012194 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Zm00001e030952_P002 Zm00001e030952 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010402 CCT_domain 458 500
IPR000315 Znf_B-box 18 62
No external refs found!