Spa_g04942


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04942

Target Alias Description ECC score Gene Family Method Actions
Adi_g013737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G076000.1 Ceric.15G076000 not classified & original description: pacid=50640210... 0.03 OrthoFinder output from all 47 species
Dac_g09225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 148 184
IPR002653 Znf_A20 70 92
No external refs found!